Discover Amazing Short-Term Rentals Across Japan: Tokyo Family Stays' Top Picks

If you're looking for unique and memorable stays across Japan, Tokyo Family Stays has curated a list of some fantastic options. Whether you're after a cozy retreat near the beach, a serene temple lodge, or a fun stay in the city, we've got you covered.

Before you travel around, we would be remiss in not mentioning the Japan Rail Pass offers unlimited travel on JR trains, including the iconic Shinkansen, making it an excellent deal for non-residents exploring multiple regions in Japan. Despite the price increase, it still offers substantial savings compared to buying individual tickets, especially if you plan to visit cities further afield like Kyoto, Osaka, Hiroshima or any of the ski areas  from Tokyo by train. It also covers select buses and ferries, providing flexibility for exploring remote areas. With the convenience of hopping on and off trains, the pass is a hassle-free way to see more of Japan at a lower cost. You can book one in advance here.

Some travelers might find that buying individual tickets could be cheaper, especially if only visiting a few destinations. To help decide, there are online calculatorsthat can compare the costs of tickets versus the pass based on your itinerary. However, the convenience of the unlimited pass—allowing you to hop on and off trains without worrying about ticket prices—can still make it worthwhile, especially if you value flexibility. Additionally, regional passes, which are cheaper than the full Japan-wide pass, can be a great option if you're focusing on specific areas like Kansai or Kyushu.

Now onto the main part of this post, presenting some of our favorite short-term rentals run by wonderful hosts, offering something special for everyone.

1. Neko Neko Inn, Tokyo

Located in the vibrant city of Tokyo, Neko Neko Inn is run by Ushka, who has created a cozy and cat-friendly environment perfect for animal lovers. This charming spot combines the excitement of Tokyo with the warmth of a homestay, making it a great option for those looking to explore the city with a bit of feline companionship. Learn more about Neko Neko Inn

neko Neko Inn

2. Shonenji Temple Lodge, MIyazaki

For a peaceful and spiritual retreat, Shōnenji Temple Lodge in Miyazaki, run by the Yoshimura family, offers a serene escape. Surrounded by nature and steeped in history, this lodge provides a unique opportunity to experience the tranquility of temple life while being close to Miyazaki’s famous cultural sites. Explore Shōnenji Temple Lodge

Miyazaki Lodge

3. Maneki Machiya, Guest House Kyoto

Maneki Machiya is a charming, traditional Japanese townhouse located in the heart of Kyoto run by Susan, offering an authentic and serene experience for visitors. The machiya combines historical architecture with modern amenities, ensuring a comfortable stay while immersing guests in the rich cultural heritage of the area. It's an ideal place to stay for those looking to explore Kyoto's ancient temples, vibrant markets, and scenic beauty, all within a uniquely local setting. Check out Maneki Machiya

4. Akira’s AirBnb, Central Spot in Osaka

Located in central Osaka, this Airbnb, run by Akira, offers a convenient base for exploring the city's bustling attractions. With a stylish and comfortable setup, it's perfect for travelers who want to be in the heart of the action while enjoying a homely atmosphere. Check out Akira's Airbnb

5. Akiya Guest House, Akiya (Kanagawa)

Akira Bnb

Beach stay out of the city? This Airbnb, run by Kirsten, a close friend of ours, is a wonderful option. Situated in a quiet neighborhood, this family-friendly spot is ideal for those looking for a relaxing and convenient place to stay while exploring  outside of Tokyo as well as offering fantastic views of Mt Fuji from the beach and access to Stand Up Paddle Boards to borrow.  Discover Kirsten's Airbnb

Bedroom Akiya Guest House

6. Mi Casa Ichinomiya, Chiba

If you're dreaming of a beach getaway in Chiba, Mi Casa Ichinomiya is the perfect spot. Located near the beautiful Ichinomiya beach, this stay offers a relaxed coastal vibe, making it an excellent choice for those wanting to surf, swim, or simply unwind by the sea. Visit Mi Casa Ichinomiya on Instagram

Micasa Ichinomiya at night

7. Casi 15, Furano

Nestled in the scenic beauty of Furano, Casi 15 is a cozy retreat perfect for nature lovers. Known for its breathtaking flower fields and winter sports, Furano offers the best of both worlds. This modern property combines comfort with stunning views, making it a great escape year-round. Ideal for those looking to experience the tranquility of Hokkaido’s countryside. Learn more about Casi 15

Hakuba Casi

8. Shimoda Beach House, Shimoda

This stunning beach house in Shimoda offers the ultimate coastal getaway. With pristine beaches and crystal-clear waters just steps away, it’s perfect for those seeking sun, sand, and relaxation. The property’s modern design and airy ambiance create a calming retreat, ideal for families or couples looking to unwind by the sea. Learn more about Shimoda Beach House

9 Aomori Countryside Lodge, Aomori

Escape to the serene landscapes of Aomori and stay at this charming countryside lodge. Whether you’re looking to explore the area’s famous apple orchards or simply relax in a rural setting, this welcoming property provides a peaceful retreat. Perfect for travelers seeking a taste of Japan’s quieter, natural beauty. Learn more about Aomori Countryside Lodge

Aomori House Scenery

10. Gunma Mountain Lodge, Gunma

Set on the historic Nakasendo trail, this rehomed Edo-period horse stable offers an authentic Japanese minpaku experience. With stunning views of Mt. Myogi and Usui Pass, it’s a perfect base for hiking, cycling, and exploring the countryside. Attached to a cycling tour company, this lodge is a dream for serious cyclists, offering bike rentals and road tours. Learn more about Gunma Mountain Lodge/GS Astuto Riders

11. Iida Country House, Iida (Nagano)

Iida Country House Nagano

Tucked away in the rural countryside of Nagano, Iida Country House is a dog-friendly retreat surrounded by nature. Run by Tom Carrick, this quiet getaway is perfect for those who enjoy the outdoors and are looking to explore Japan's rustic side. Whether hiking or just relaxing in the peaceful countryside, this house offers a true escape. Learn more about Iida Country House

12. Renovated traditional house next to Nijo Castle, Kyoto

For those wanting a city stay with a traditional touch, try this traditional house which offers a serene blend of modern comforts and historical charm. Located in the cultural heart of Kyoto, this lovely home allows you to explore iconic temples and gardens, while enjoying a tranquil space to unwind after a day of sightseeing. Learn more about this traditional home

Is Skiing/snowboarding more your thing? Try these out!

1. Casi 67 Chalet, Niseko

For the ski enthusiasts, Casi 67 Chalet in Niseko is a winter wonderland. With world-class slopes and a cozy chalet to return to after a day on the snow, this is a top choice for those looking to enjoy Japan’s famous powder snow in style. Learn more about Casi 67 Chalet

Hakuba Casi 15 Slopes

2. Tsuki Villa, Nagano/Niigata

Yuki Villa is a self-contained three-storey villa perfect for couples, families or small groups. Located in a picturesque street in the township of Iiyama, 1km – 3 minutes drive from Iiyama Shinkansen station.

Located within 20-30 minutes to not just one, but 10 different ski resorts in Nagano and Niigata Prefectures. These include Nozawa Onsen, famous for its snow powder; Shiga Kogen, the highest and largest ski resort in Japan; to Myoko and Suginohara, with its 8.5km long ski run.

Hosts are Denise and Patrick McCann who describe themselves as snow lovers, wine connoisseurs, restaurant gourmands, artists and gallivanters. Anywhere their travels take them, they seek out food, wine, museums, galleries and markets. It is all about people, place and produce. Explore Tsuki Villa

3. Kodama Lodge, Ski-In/Ski-Out, Hakuba-Norikura

Kodama Lodge combines Swiss hospitality with a cozy Japanese-European style, making it an ideal spot for ski lovers and powder enthusiasts. Located in one of Japan's premier ski regions, the lodge offers a unique Ski-In/Ski-Out access to Hakuba-Norikura and Cortina slopes and the most famous tree runs of the Hakuba Valley.

Géraldine and Simon, seasoned freeride competitors, organise guided backcountry ski/snowboard packages, sharing their mountain expertise. Additionally, Géraldine, a certified forest therapy guide, offers mindful nature retreats, helping guests unwind and reconnect with nature.

Discover Kodama Lodge

You can also read more about Embracing Nature Shinrin Yoko here.

4. Hakuba Mountain Chalet, Hakuba

Located in the heart of one of Japan’s premier ski regions, Hakuba Mountain Chalet is the perfect spot for winter sports enthusiasts. With ski slopes and outdoor activities at your doorstep, this cozy chalet offers a true mountain retreat with stunning alpine views. A great choice for adventurers and families alike. Learn more about Hakuba Mountain Chalet

5. Tenjin Lodge, Minakami

Last but not least, Tenjin Lodge in Minakami Gunma, run by Aussie Kieran, offers a fantastic stay for outdoor lovers. Located near some of Japan’s best ski resorts and adventure spots, it’s perfect for those who love skiing, hiking, or simply exploring the great outdoors. Travelling with kids? They have ski instructors who teach in English too  Visit Tenjin Lodge

These are just a few of the amazing places we love to support. Whether you're planning a cultural escape, a beach retreat, or a ski adventure, these short-term rentals across Japan offer something unique for every traveler. Of course, for your Tokyo leg of the visit booking with Tokyo Family Stays is a must for providing a home-like comfort while you explore the vibrant city. With options tailored to every type of traveler, from families to solo adventurers, these accommodations ensure that your stay is both memorable and enjoyable. Happy exploring!

Tenjin Lodge Ski Fields

These are just a few of the amazing places we love to support. Whether you're planning a cultural escape, a beach retreat, or a ski adventure, these short-term rentals across Japan offer something unique for every traveler. Of course, for your Tokyo leg of the visit booking with Tokyo Family Stays is a must for providing a home-like comfort while you explore the vibrant city. With options tailored to every type of traveler, from families to solo adventurers, these accommodations ensure that your stay is both memorable and enjoyable. Happy exploring!

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